DD-INR: Dynamics-Driven Implicit Neural Representation for Accelerated Whole-Brain Functional MRI Reconstruction
2026-06-09 Qiaoxin Li, Caini Pan, Pierre-Antoine Comby, et al. Lecture Notes in Computer Science

Accelerated acquisition of fMRI enables enhanced detection of neurovascular (BOLD) activity in the brain, but image reconstruction becomes challenging with high k-space undersampling: Task-evoked BOLD signals are small in magnitude, which traditional anatomical MRI reconstruction methods fail to recover, as they favor…

Non-cartesian 3D-SPARKLING vs cartesian 3D-EPI encoding schemes for functional magnetic resonance Imaging at 7 Tesla
2024-05-13 Zaineb Amor, Philippe Ciuciu, Chaithya Giliyar Radhakrishna, et al. Plos one

The quest for higher spatial and/or temporal resolution in functional MRI (fMRI) while preserving a sufficient temporal signal-to-noise ratio (tSNR) has generated a tremendous amount of methodological contributions in the last decade ranging from Cartesian vs. non-Cartesian readouts, 2D vs.

B0 field distortions monitoring and correction for 3D non-Cartesian fMRI acquisitions using a field camera: Application to 3D-SPARKLING at 7T
2023-08-03 Zaineb Amor, Chaithya Giliyar Radhakrishna, Caroline Le Ster, et al. Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting

The benefit of retrospective correction of static and dynamic B0 field imperfections was studied on non-Cartesian compressed sensing-based acquisition patterns by taking as an example 3D-SPARKLING encoding scheme. Long-TR dynamic acquisitions of T2*-weighted MRI (fMRI-like) volumes were acquired at 7T, retrospectively…

Prospects of non-Cartesian 3D-SPARKLING encoding for functional MRI: A preliminary case study for retinotopic mapping
2023-08-03 Zaineb Amor, Chaithya Giliyar Radhakrishna, Guillaume Daval-Frérot, et al. Joint Annual Meeting ISMRM-ESMRMB & ISMRT 31st Annual Meeting

For the first time, non-Cartesian 3D-SPARKLING (Spreading Projection Algorithm for Rapid K-space sampLING) encoding scheme was used for task-based fMRI (retinotopic mapping) at 7T. Additionally, this new acquisition technique was compared with 3D-EPI, considered as one of the reference acquisition schemes in…

Impact of ΔB0 field imperfections correction on BOLD sensitivity in 3D-SPARKLING fMRI data
2023-06-03 Zaineb Amor, Caroline Le Ster, Chaithya Giliyar Radhakrishna, et al. Magnetic Resonance in Medicine

Purpose Static and dynamic field imperfections are detrimental to functional MRI (fMRI) applications, especially at ultra‐high magnetic fields (UHF). In this work, a field camera is used to assess the benefits of retrospectively correcting field perturbations on Blood Oxygen Level Dependent (BOLD) sensitivity in…